Phylogibbs Online
Warning! Input file should be DNA sequences in fasta format. Not a raw dialign or clustalW output! Plain text, not a MSWord or any other format! Please see documentation page for an example.
general settings
motif width number of motifs number of windows
number of cycles WM prior pseudocount single strand mode
alignment level input file

phylogeny settings
general phylogeny

background distribution settings
N-correlationweight background probabilies
background file

external weight matrices
WM file

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